Staff – Bioinformatics Centre - University of Copenhagen

Thomas Wim Hamelryck

Thomas Wim Hamelryck

Associate Professor


  1. 2019
  2. Published

    Langevin diffusions on the torus : estimation and applications. / García-Portugués, Eduardo; Sørensen, Michael; Mardia, Kanti V.; Hamelryck, Thomas.

    In: Statistics and Computing, 2019, p. 1-22.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. 2018
  4. Published

    MyPMFs : a simple tool for creating statistical potentials to assess protein structural models. / Postic, Guillaume; Hamelryck, Thomas Wim; Chomilier, Jacques; Stratmann, Dirk.

    In: Biochimie, Vol. 151, 2018, p. 37-41.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. 2017
  6. Published

    A Generative Angular Model of Protein Structure Evolution. / Golden, Michael; Garcia-Portugues, Eduardo; Sørensen, Michael; Mardia, Kanti V.; Hamelryck, Thomas; Hein, Jotun.

    In: Molecular Biology and Evolution, Vol. 34, No. 8, 08.2017, p. 2085-2100.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. 2016
  8. Published

    Bayesian inference of protein ensembles from SAXS data. / Antonov, Lubomir Dimitrov; Olsson, S.; Boomsma, Wouter Krogh; Hamelryck, Thomas Wim.

    In: Physical Chemistry Chemical Physics, Vol. 18, No. 8, 2016, p. 5832-5838.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Computational redesign of thioredoxin is hypersensitive towards minor conformational changes in the backbone template. / Johansson, Kristoffer Enøe; Johansen, Nicolai Tidemand; Christensen, Signe; Horowitz, Scott; Bardwell, James C. A. ; Olsen, Johan Gotthardt; Willemoës, Martin; Lindorff-Larsen, Kresten; Ferkinghoff-Borg, Jesper; Hamelryck, Thomas Wim; Winther, Jakob R.

    In: Journal of Molecular Biology, Vol. 428, No. 21, 2016, p. 4361-4377.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. 2015
  11. Published

    Bayesian inference of protein structure from chemical shift data. / Bratholm, Lars Andersen; Christensen, Anders Steen; Hamelryck, Thomas Wim; Jensen, Jan Halborg.

    In: PeerJ, Vol. 3, e861, 2015.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Proteins, physics and probability kinematics : a Bayesian formulation of the protein folding problem. / Hamelryck, Thomas Wim; Boomsma, Wouter Krogh; Ferkinghoff-Borg, Jesper; Foldager, Jesper Illemann; Frellsen, Jes; Haslett, John; Theobald, Douglas.

    Geometry driven statistics. ed. / Ian L. Dryden; John T. Kent. Wiley, 2015. p. 356-376.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  13. 2014
  14. Published

    Equilibrium simulations of proteins using molecular fragment replacement and NMR chemical shifts. / Boomsma, Wouter Krogh; Tian, Pengfei; Frellsen, Jes; Ferkinghoff-Borg, Jesper; Hamelryck, Thomas Wim; Lindorff-Larsen, Kresten; Vendruscolo, Michele.

    In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 111, No. 38, 2014, p. 13852-13857.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Formulation of probabilistic models of protein structure in atomic detail using the reference ratio method. / Valentin, Jan; Andreetta, Christian; Boomsma, Wouter Krogh; Bottaro, Sandro; Ferkinghoff-Borg, Jesper; Frellsen, Jes; Mardia, Kanti V.; Tian, Pengfei; Hamelryck, Thomas Wim.

    In: Proteins: Structure, Function, and Bioinformatics, Vol. 82, No. 2, 2014, p. 288-299.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    FragBuilder : an efficient Python library to setup quantum chemistry calculations on peptides models. / Christensen, Anders Steen; Hamelryck, Thomas Wim; Jensen, Jan Halborg.

    In: PeerJ, Vol. 2, e277, 2014.

    Research output: Contribution to journalJournal articleResearchpeer-review

Previous 1 2 3 4 5 Next

ID: 5765